|| [[figures]]/ || //directory with graphs and figures//|| || [[bin]]/ || //directory with programs// || || [[DataSets data_*]] || || || [[aba_tools]] || I/O scripts || || [[paints]]/ || directory with region boundaries || || [[reference_atlas]]/ || directory with ABA reference atlas || || [[follow_the_lines]]/ || directory with region boundaries which more strictly follow the coordinates derived from the ABA reference atlas, without so many of my subjective corrections || || [[follow_the_lines_plus_obvious_corrections]]/ || follow the lines plus only the most obvious corrections || || [[Mouse.aba.R.coordinate_file_369.2007-08-28.23460.coord]] || try8 caret fiducial coordinate file || [[Mouse.aba.R.spec]] || caret spec file || || [[Mouse.aba.R.coordinate_file_368.2007-08-28.23460.coord]] || try8 caret raw coord file || || [[Mouse.aba.R.CerebralHull.2007-08-28.BRIK]] || try8 caret cerebral hill brik file || || [[Mouse.aba.R.CerebralHull.2007-08-28.HEAD]] || try8 caret cerebral hill head file || || [[Mouse.aba.R.CerebralHull.vtk]] || caret cerebral hull vtk file || || [[Mouse.aba.R.border_color_file_4.2007-08-27.bordercolor]] || try 8 caret border color file || || [[Mouse.aba.R.border_projection_file_93.2007-08-28.borderproj]] || try 8 caret border projection file || || [[Mouse.aba.R.topology_file_367.2007-08-28.23460.topo]] || try8 caret closed topology file || || [[aba_annotation_ourctx.nii]] || NIFTI ABA cortical annotation volume || || [[Mouse.aba.R.Ellipsoidal.2007-08-28.23460.coord]] || try8 caret ellipsoidal coord file || || [[Mouse.aba.R.Inflated.2007-08-28.23460.coord]] || try8 caret Inflated coord file || || [[Mouse.aba.R.VeryInflated.2007-08-28.23460.coord]] || try8 caret VeryInflated coord file || || [[Mouse.aba.R.Spherical.2007-08-28.23460.coord]] || try8 caret Spherical coord file || || [[Mouse.aba.R.border_file_96.2007-08-28.border]] || try8 caret Inflated border file || || [[Mouse.aba.R.border_file_97.2007-08-28.border]] || try8 caret VeryInflated border file || || [[Mouse.aba.R.border_file_98.2007-08-28.border]] || try8 caret Spherical border file || || [[Mouse.aba.R.border_file_99.2007-08-28.border]] || try8 caret ellipsoidal border file || || [[Mouse.aba.R.metricfile_119.2007-08-28.23460.metric]] || try8 caret metric file || || [[composite_try8_gs_2200_10000_100_1100_500_500.metric]] || surface-mapped gene expression data file|| || [[Mouse.aba.R.paint_file_20.2007-08-28.23460.paint]] || try8 paint file || || [[paint.txt]] || paint file (hand-edited so that it can be read into matlab) || || [[paint_names.txt]] || names corresponding to numbered areas in {{{paint.txt}}} || || [[my_griddata.m]] || custom version of Octave's "griddata" command which replaces the call to "dsearch" with a call to "my_dsearch" || || [[my_dsearch.m]] || Octave doesn't provide dsearch, so here's a simple version of it || || [[]] || ||
Summary:
This change is a minor edit.
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